ibn-salem/chromint: Analysis of Chromatin Interactions

This package provides functions to analyse genome-wide chromatin intraction data, like Hi-C. There are functions to parse high-resolution Hi- C data from Rao et al. 2014, Cell to quantify intreaction frequencies between pairs of genomic regions (like genes and enhancers) and randomizations to compute enrichment of interactions.

install.packages("remotes")
remotes::install_github("ibn-salem/chromint")