ibn-salem/chromint: Analysis of Chromatin Interactions
Version 0.0.0.9000

This package provides functions to analyse genome-wide chromatin intraction data, like Hi-C. There are functions to parse high-resolution Hi- C data from Rao et al. 2014, Cell to quantify intreaction frequencies between pairs of genomic regions (like genes and enhancers) and randomizations to compute enrichment of interactions.

Getting started

Package details

Maintainer
LicenseGPL-3
Version0.0.0.9000
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("ibn-salem/chromint")
ibn-salem/chromint documentation built on May 17, 2017, 1:32 a.m.