ibn-salem/chromint
Analysis of Chromatin Interactions

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Analysis of Chromatin Interactions

chromintchromint: A package to analyse chromatin interactions.
getBinGRGet bins of a single chromosome.
getChrToBinOffsetGet bin offset for each chromosome.
normalizeMatrixNormalize interaction matrix using normalization vector.
parseCaptureHiCParse Capture Hi-C data as 'GInteractions' object.
parseRaoHiCtoGIParse Hi-C interactions from Rao et. al 2014 as...
ibn-salem/chromint documentation built on May 18, 2019, 1:29 a.m.

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