merge.SCTAssay: Merge SCTAssay objects

In ibseq/scs-analysis: Tools for Single Cell Genomics

Description

Merge SCTAssay objects

Usage

## S3 method for class 'SCTAssay'
merge(
  x = NULL,
  y = NULL,
  add.cell.ids = NULL,
  merge.data = TRUE,
  na.rm = TRUE,
  ...
)

Arguments

x	A Seurat object
y	A single Seurat object or a list of Seurat objects
add.cell.ids	A character vector of length(x = c(x, y)); appends the corresponding values to the start of each objects' cell names
merge.data	Merge the data slots instead of just merging the counts (which requires renormalization); this is recommended if the same normalization approach was applied to all objects
na.rm	If na.rm = TRUE, this will only preserve residuals that are present in all SCTAssays being merged. Otherwise, missing residuals will be populated with NAs.
...	Arguments passed to other methods

ibseq/scs-analysis documentation built on Feb. 27, 2021, 12:35 a.m.