download_nog_hmm: Download specific hmm datasets from EggNOG.
In iferres/phylen: Search Core Genes Using HMMs, Compute Multiple Alignment, Concatenate And Compute Phylogeny
Description
Usage
Arguments
Value
Author(s)
Description
Takes a nog prefix and downloads a compressed (.tar.gz) file
from EggNOG db containing the hmm models of the specified group.
Usage
1
download_nog_hmm(nog.prefix = "proNOG", onDir = ".")
Arguments
nog.prefix
character, a nog prefix as returned by
list_eggnogdb function.
onDir
The directory name where to download the file.
Value
A tar.gz compressed file on the specified directory. On console it
returns the path to the downloaded file.
Author(s)
Ignacio Ferres
iferres/phylen documentation built on May 24, 2019, 2:04 a.m.
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Description Usage Arguments Value Author(s)
Description
Takes a nog prefix and downloads a compressed (.tar.gz) file from EggNOG db containing the hmm models of the specified group.
Usage
1 | download_nog_hmm(nog.prefix = "proNOG", onDir = ".")
|
Arguments
nog.prefix |
|
onDir |
The directory name where to download the file. |
Value
A tar.gz compressed file on the specified directory. On console it returns the path to the downloaded file.
Author(s)
Ignacio Ferres
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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