list_manager: A Class for Managing List Content and Operations

Description Usage Arguments Details Value Author(s) See Also Examples

Description

This class may be called itself, and all the useful methods it has are available through the list objects themselves.

Usage

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Arguments

Service-class

a Service-class object containing the base URL and API token.

Details

The public gene lists for each Mine are available at the websites obtained by the following command: paste0(listMines()["Mine_Name"], "/bag.do?subtab=view")

Get a new ListManager to use with this service. This class provides methods to manage list contents and operations.

Value

list_manager function returns an object containing the following values:

DEFAULT_LIST_NAME

"my_list"

DEFAULT_DESCRIPTION

"List created with R client library"

URL endpoints

LIST_PATH, INTERSECTION_PATH, UNION_PATH, DIFFERENCE_PATH, SUBTRACTION_PATH

mine

the base URL

token

the API token

Author(s)

InterMine Team

See Also

ListManager-methods, ListManager-class

Examples

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#hashed out example as requires API key
#im.human.list <- list_manager(initInterMine(listMines()["HumanMine"],"TOKEN")) #Add your API Token key
#class(im.human.list)
#resp <- get_list(im.human.list, " PL_Pax6_Targets")
#resp

intermine/intermineR documentation built on May 12, 2021, 2:45 a.m.