Files in isglobal-brge/MEAL
Perform methylation analysis

.Rbuildignore
.gitignore
DESCRIPTION
LICENSE
MEAL.Rproj
NAMESPACE
NEWS
R/AnalysisRegionResults_Constructor.R R/AnalysisResults_Constructor.R R/DAPipeline.R R/DAProbe.R R/DARegion.R R/DARegionAnalysis.R R/Defunct.R R/MEAL.R R/RDAset.R R/ResultSet_exportResults.R R/ResultSet_getGeneVals.R R/ResultSet_getRDAresults.R R/ResultSet_plotRDA.R R/ResultsSet_topRDAhits.R R/SNPsforCPG.R R/calculateRelevantSNPs.R R/changeVectorType.R R/computeRDAR2.R R/correlationMethExprs.R R/correlationMethSNPs.R R/createModel.R R/createRanges.R R/explainedVariance.R R/filterResults.R R/filterSet.R R/getFeatureDataFun.R R/getProbeResults.R R/normalSNP.R R/plotBestFeatures.R R/plotFeature.R R/plotLM.R R/plotRegion.R R/prepareMethylationSet.R R/preparePhenotype.R R/runBlockFinder.R R/runBumphunter.R R/runDMRcate.R R/runDiffMeanAnalysis.R R/runDiffVarAnalysis.R R/runPipeline.R R/runRDA.R R/runRegionAnalysis.R man/DAPipeline.Rd man/DAProbe.Rd man/DARegion.Rd man/DARegionAnalysis.Rd man/MEAL-defunct.Rd man/MEAL.Rd man/RDAset.Rd man/analysisRegionResults.Rd man/analysisResults.Rd man/calculateRelevantSNPs.Rd man/computeRDAR2.Rd man/correlationMethExprs.Rd man/correlationMethSNPs.Rd man/createRanges.Rd man/explainedVariance.Rd man/exportResults.Rd man/filterResults.Rd man/filterSet.Rd man/getGeneVals.Rd man/getProbeResults.Rd man/getRDAresults.Rd man/normalSNP.Rd man/plotBestFeatures.Rd man/plotFeature.Rd man/plotLM.Rd man/plotRDA.Rd man/plotRegion.Rd man/prepareMethylationSet.Rd man/preparePhenotype.Rd man/runBlockFinder.Rd man/runBumphunter.Rd man/runDMRcate.Rd man/runDiffMeanAnalysis.Rd man/runDiffVarAnalysis.Rd man/runPipeline.Rd man/runRDA.Rd man/runRegionAnalysis.Rd man/topRDAhits.Rd tests/testthat.R tests/testthat/test_03createModel.R tests/testthat/test_04filters.R tests/testthat/test_05probeAnalysis.R tests/testthat/test_06regionAnalysis.R tests/testthat/test_07pipeline.R tests/testthat/test_09explainedVariance.R tests/testthat/test_10exportResults.R tests/testthat/test_11plotting.R tests/testthat/test_12RDA.R tests/testthat/test_13SNPsCalculation.R tests/testthat/test_14getGenes.R tests/testthat/test_15correlationMethExpr.R vignettes/MEAL.Rmd
vignettes/vignette.bib
isglobal-brge/MEAL documentation built on Oct. 29, 2017, 3:22 p.m.