fit.mfp: Function to fit a multivariable fractional polynomial model...

Description Usage Arguments Examples

Description

Fits and mfp model for each row in data using mfp package

Usage

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fit.mfp(data = data_m, vars_df = vars_df, df = 4L, alpha = 0.05,
  select = 0.05, cores = 1L, verbose = FALSE, ...)

Arguments

vars_df

data.frame with sampes as rows and variables as columns

df

degrees of freedom for mfp, default 4, 1 would be linear

alpha

sets the FP selection level for all predictors. Values for individual predictors may be changed via the fp function in the formula.

select

select: sets the variable selection level for all predictors. Values for individual predictors may be changed via the fp function in the formula.

cores

cores in case of parallelization (no windows)

verbose

logical to verbose (comment) the steps of the function, default(FALSE)

data_m

ExpressionSet or data.frame with samples as columns and observations as rows could be an ExpressionSet(modif!)

Examples

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to be built

isglobal-brge/nlOmicAssoc documentation built on May 9, 2019, 8:16 a.m.