ens2symbol: Convert ENS to symbols

In itamuria/immunoeasy: Make Immuno Therapies An Easier Process

Convert ENS to symbols

Description

Search symbols from ENG ids and calculate the length of the gene

Usage

ens2symbol(
  ens_ids,
  specie = "hsapiens_gene_ensembl",
  attributes_list = c("ensembl_gene_id", "hgnc_symbol", "ensembl_gene_id",
    "chromosome_name", "start_position", "end_position"),
  filter_name = "ensembl_gene_id"
)

Arguments

ens_ids	a vector with the ensemble ids
specie	Specie that we want to get information from
attributes_list	attributes that we want to obtain in the last table
filter_name	the source information

Value

a data framewith the symbol, chromosome, start position, end position and length

Examples

ens2symbol(ens_ids = c("ENSG00000000003"))

itamuria/immunoeasy documentation built on Sept. 30, 2022, 5:53 a.m.