four_counter2summary: Merge all the counters together

In itamuria/immunoeasy: Make Immuno Therapies An Easier Process

Merge all the counters together

Description

Merge all the counters together

Usage

four_counter2summary(
  semi_subread,
  semi_cuff,
  semi_quant,
  semi_htseq,
  ngenes = NULL,
  export_excel_name = "four_together.xlsx",
  save_final = FALSE,
  dif_cuartiles = FALSE
)

Arguments

ngenes	Selection of genes that we want to filter
export_excel_name	Name of the final excel name
dif_cuartiles	If we want to calculate the differences between cuartiles
subread_name	Data frame with normalized subread cuartiles
cuff_name	Data frame with normalized cufflink cuartiles
htseq_name	Data frame with normalized htseq cuartiles
quant_name	Data frame with normalized quant cuartiles
mfl_number	Mean length
save_intermediate	If we want to save intermediate files

Value

data frame with all the information merged

Examples

## Not run: 
four_counter2summary (subread_name,cuff_name,quant_name,htseq_name,
                               ngenes = NULL, mfl_number = mfl_number,
                               export_excel_name = "four_together.xlsx",
                               save_intermediate = FALSE)

## End(Not run)

itamuria/immunoeasy documentation built on Sept. 30, 2022, 5:53 a.m.