API for ivabudimir/meNet
Correlation-based network analysis of methylation data
| Global functions | |
|---|---|
| .check_cgMeta_wCols | Source code |
| .check_corM_dataDF | Source code |
| .get_all_pairwiseCG | Source code |
| .intersect_edges | Source code |
| .is_color | Source code |
| .matchChr | Source code |
| .new_position_for_label | Source code |
| .new_position_within_group | Source code |
| .transform_gene_region | Source code |
| .transform_one_gene_region | Source code |
| .words_listing | Source code |
| Bacalini_betaValues | Man page |
| Bacalini_sampleSheet | Man page |
| CpG_annoHM450K | Man page |
| CpG_genes | Man page |
| CpG_in_CGI | Man page Source code |
| Johansson_residuals | Man page |
| N_ranges | Man page |
| UCSC_CGI | Man page |
| UCSC_genes | Man page |
| boxed_heatmap | Man page Source code |
| coord_sort | Man page Source code |
| cor_meanSd | Source code |
| cor_permutationTest | Man page Source code |
| cor_prTest | Source code |
| cor_resamplingStats | Man page Source code |
| find_CpG | Man page Source code |
| max_normalization | Man page Source code |
| meMultiplex | Man page Source code |
| meMultiplex_communities | Man page Source code |
| meMultiplex_to_multinet | Man page Source code |
| meNet_CGI | Man page Source code |
| meNet_cor | Man page Source code |
| meNet_gene | Man page Source code |
| meNet_singleCGI | Man page Source code |
| meNet_singleGene | Man page Source code |
| neg_max_normalization | Man page Source code |
| plotCI_meCGI | Man page Source code |
| plotCI_meCpG | Man page Source code |
| plot_multiplex | Man page Source code |
| read_infomap_communities | Man page Source code |
