Bacalini_sampleSheet: Bacalini sample sheet
In ivabudimir/meNet: Correlation-based network analysis of methylation data
Description
Usage
Format
Source
References
Description
Description file for samples in Bacalini data set \insertCitebacalini2015identificationmeNet.
87 samples have a family-based structure with a Down syndrome patient, a mother
and one unaffected sibling coming from each of 29 included families. Thus, each
sample belongs to one of three groups: Down syndrome patients (DSP), Down
syndrome mothers (DSM) or Down syndrome siblings (DSS). 'meNet::Bacalini_sampleSheet'
is a subset of the original sample sheet which includes more details for every
samples.
Usage
1
Format
A data frame with 87 rows and columns:
- GSM
Unique identifier for every sample.
- Group
A group to which the sample belongs. One of DSP, DSM or DSS.
Source
Original sample sheet was downloaded from the Gene Expression Omnibus (GEO)
data repository as part of the data set with accession number GSE52588
https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52588.
References
\insertAllCited
ivabudimir/meNet documentation built on Dec. 20, 2021, 8:03 p.m.
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Description Usage Format Source References
Description
Description file for samples in Bacalini data set \insertCitebacalini2015identificationmeNet. 87 samples have a family-based structure with a Down syndrome patient, a mother and one unaffected sibling coming from each of 29 included families. Thus, each sample belongs to one of three groups: Down syndrome patients (DSP), Down syndrome mothers (DSM) or Down syndrome siblings (DSS). 'meNet::Bacalini_sampleSheet' is a subset of the original sample sheet which includes more details for every samples.
Usage
1 |
Format
A data frame with 87 rows and columns:
- GSM
Unique identifier for every sample.
- Group
A group to which the sample belongs. One of DSP, DSM or DSS.
Source
Original sample sheet was downloaded from the Gene Expression Omnibus (GEO) data repository as part of the data set with accession number GSE52588 https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52588.
References
\insertAllCitedR Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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