A sample output from
cluster information. This dataframe is in the format produced by
object to a dataframe:
A dataframe of 9 obs. and 7 variables.
Was obtained from running
on the Arabidopsis thaliana chromosome 3 reference
sequence, followed by clustering using
packClust. Contains the following features:
start - the predicted element's start base sequence position.
end - the predicted element's end base sequence position.
seqnames - character string referring to the
sequence name in
Genome to which
end refer to.
The dataset was generated as in the example below.
data(arabidopsisThalianaRefseq) packMatches <- packSearch( Biostrings::DNAString("CACTACAA"), arabidopsisThalianaRefseq, elementLength = c(300, 3500), tsdLength = 3 )
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