Man pages for jameshay218/driftSim
Short-sighted evolution of influenza cellular receptor binding avidity shapes influenza epidemic dynamics

calculate_deltaV_matrixCalculate binding avidity adaptation matrix
countKsCounts Ks
driftSim-packageIndividual based model for evolution of influenza viruses
exampleParametersExample parameters
generateHostKDistGenerate distribution of host immunity from file
generateHostKDist_2Generate distribution of host immunity
generateKSamplesGenerate N samples of immune values (K)
generateStartKDraws a single starting immune value from a cumulative vector...
plot_SIRSIR dynamics plot
run_simulationMain simulation interface
runSimulationAppLaunches the shiny app interface
run_simulation_cppInterface to the entire C++ driftSim simulation
scenario_descriptionsDescriptions of model scenarios
jameshay218/driftSim documentation built on Aug. 2, 2017, 8:33 p.m.