Description Usage Arguments Value
Sets up the parameter table based on the version, locations and allowable parameters
1 2 3 | parTabSetup(locationNames, version, locationInfo, useInc,
allowablePars = NULL, sharedProb = TRUE, normLik = FALSE,
locationWeights = FALSE, forecast = FALSE)
|
locationNames |
the vector of locations to include |
version |
Version 1-3 indicating which form of the microcephaly risk curve is to be used |
locationInfo |
a table with location name, L_H (human lifespan in years) and N_H (human population size). See data(locationInfo) |
useInc |
bool indicating whether or not ZIKV incidence data is considered here |
allowablePars |
data frame of allowable parameters for density and t0 |
sharedProb |
bool if the version with shared microcephaly parameters should be used |
normLik |
Using normal likelihood function for data. If false, uses binomial likelihood. If true, uses normal likelihood which incorporates two standard deviation parameters for ZIKV and microcephaly incidence data |
locationWeights |
bool deciding if data from different locations should be weighted |
forecast |
if TRUE, sets up the parameter table for the forecasting analysis |
the modified parameter table
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