API for jameshay218/zikaProj
zikaInfer

Global functions
.onLoad Source code
add_inc_plot Source code
average_buckets Man page Source code
b.calc Man page Source code
calc_deviance Man page Source code
calc_post_mean Man page Source code
calc_post_var Man page Source code
calculate_AR Man page Source code
calculate_BIC Man page Source code
calculate_DIC Man page Source code
calculate_gamma_mode Man page Source code
combine_chains Man page Source code
convert_date_to_number Source code
convert_name_to_location Man page Source code
convert_name_to_location_factor Man page Source code
convert_number_to_date Source code
createLocationParTable Man page Source code
createParTable Man page Source code
create_forecast_function Source code
create_polygons Source code
create_posterior Man page Source code
cumul_true Man page Source code
density.calc Man page Source code
density_plot_func Man page Source code
density_plot_state Man page Source code
exampleParTab Man page
extra_microceph_calculations Man page Source code
find_peak_times Man page Source code
forecast_CRS Man page Source code
forecast_known_inc_seir Source code
forecast_microceph Man page Source code
forecast_model_normal Source code
fromUnitScale Man page Source code
generateAllowableParams Man page Source code
generateStartingParTab Man page Source code
generate_foi Man page Source code
generate_micro_curve Man page Source code
generate_multiple_data Man page Source code
generate_peak_time_table Source code
generate_plot_date_labels Man page
generate_probM Man page Source code
generate_probM_aux Man page Source code
generate_probM_forecast Man page Source code
generate_probM_forecast_OLD Man page Source code
generate_riskI Man page Source code
generate_riskS Man page Source code
generate_x_labels Source code
generate_y0s Man page Source code
getDaysPerMonth Man page Source code
get_best_pars Man page Source code
get_correct_order Man page Source code
get_epidemic_locations Man page Source code
get_index_pars Man page Source code
get_lower_micro_bound Man page Source code
get_max_micro Man page Source code
get_max_micro_day Man page Source code
get_microceph_range Man page Source code
get_upper_micro_bound Man page Source code
inc_plot Source code
incidence_likelihood Man page Source code
incidence_likelihood_norm Man page Source code
indiv_model_fit Source code
isolate_location Man page Source code
likelihood_probM Man page Source code
likelihood_probM_norm Man page Source code
load_mcmc_chains Man page Source code
locationInfo Man page
main_model_fits Source code
make_micro_dat Man page
median.quantile Man page Source code
microceph_plot Source code
microceph_v1 Man page Source code
microceph_v2 Man page Source code
microceph_v3 Man page Source code
microceph_v4 Man page Source code
mvr_proposal Man page Source code
overlapPlots Source code
parTabSetup Man page Source code
parTabSetup_aux Man page Source code
plot_MCMC Man page
plot_best_trajectory_multi Man page Source code
plot_best_trajectory_single Man page Source code
plot_micro_bounds Man page
plot_random_microceph_curves Man page
plot_setup_data Man page Source code
posterior_CRS Man page Source code
posterior_complex_buckets Man page Source code
posterior_inc Man page Source code
posterior_known_inc Man page Source code
posterior_known_inc_seir Man page Source code
posterior_simple_buckets Man page Source code
print_version_names Man page Source code
proposalfunction Man page Source code
r0.calc Man page Source code
r0.vector Man page Source code
read_all_data Man page Source code
read_inipars Man page Source code
rm_scale Man page Source code
run_metropolis_MCMC Man page Source code
scaletuning Man page Source code
setupListPars Man page Source code
setupLocationParTable Man page Source code
setupParsLong Man page Source code
setupParsODE Man page Source code
simeq Man page Source code
solveSEIRModel Man page Source code
solveSEIRModel_lsoda Man page Source code
solveSEIRModel_rlsoda Man page Source code
sum_buckets Man page Source code
sum_n_vector Man page Source code
summarise_chain Man page Source code
to.png Man page
to.svg Man page
toUnitScale Man page Source code
zikaInfer Man page
zikaInfer-package Man page
jameshay218/zikaProj documentation built on Nov. 8, 2019, 11:01 a.m.