Description Usage Arguments Value
For a given run name and state, plots the best zika and microcephaly incidence for all states
1 2 3 4 |
chain |
the MCMC chain of estimated parameters |
realDat |
the data frame of data used for fitting |
parTab |
the parameter table used for fitting |
ts |
vector of times to solve model over |
runs |
the number of runs to use for prediction intervals |
incDat |
optional data frame of actual incidence data |
mcmcPars |
a named vector of the burnin, adaptive period and thinning |
ylimM |
ylimit for the microcephaly plot |
ylimI |
ylimit for the incidence plot |
startDay |
if realDat is not provided, need to provide the first day on which we want to see predicted microcephaly numbers |
months |
if realDat not provided, need to provide the number of months of forecasted data that we wish to see |
weeks |
if no incidence data provided, number of weeks over which we should plot the data |
a ggplot object with the incidence plots
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.