variableSummary: Variable data summary

In jameslhao/dbgapr_dev: A dbGaP Phenotype Data Organizer

Description

The method returns the statistical summary of a given variable of the class study. The statistical summary is also displayed along with the variable meta-info.

Usage

variableSummary(object, phvAcc, ...)

## S4 method for signature 'Study,character'
variableSummary(object, phvAcc, ...,
  emptyToNa = FALSE)

Arguments

object	Study class object.
phvAcc	a character string. The dbGaP variable accessions
...	There are optional arguments.
emptyToNa	a logical value. (optional) If TRUE, converts the empty value to NA. Not convert if FALSE (default).

Value

a data frame. The statistical summary data.

Methods (by class)

• object = Study,phvAcc = character: of class Study

Examples

## Not run: 

s <- Study(phsAcc = 'phs000001.v3.p1')
variableSummary(s, phvAcc = 'phv00054119.v1.p1.c2')

## End(Not run)

jameslhao/dbgapr_dev documentation built on May 8, 2019, 11:03 p.m.