Files in jameslhao/dbgapr_dev
A dbGaP Phenotype Data Organizer

.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/Commons.R R/Study.R R/commons_internal.R R/commons_public.R R/dbgap.R R/study_internal.R R/study_public.R README.Rmd README.md
dbgapr.Rproj
inst/doc/introduction.Rmd
inst/doc/introduction.html
man/Commons-class.Rd man/Study-class.Rd man/accInfo.Rd man/buildVarCodeValCombo.Rd man/checkInputPath.Rd man/checkObjStudyByAcc.Rd man/checkPhvAccList.Rd man/cleanObjAcc.Rd man/commons_internal.Rd man/commons_public.Rd man/composeFileInfoJson.Rd man/composeObjAcc.Rd man/convertEnumVarColName.Rd man/copyUserFile.Rd man/createPrjDir.Rd man/dataDicXmlParser.Rd man/dbgapr-package.Rd man/detectVariableDataType.Rd man/displayTable.Rd man/displayTextFile.Rd man/filterBySubjIds.Rd man/ftpDownload.Rd man/getAllDatasetInfo.Rd man/getAllStudyInfo.Rd man/getAvailPhtVer.Rd man/getDataDicByStudy.Rd man/getDatasetDataByPhtAcc.Rd man/getDatasetMetaByStudy.Rd man/getExtData.Rd man/getIdInfo.Rd man/getMetaByObjAcc.Rd man/getPrjDir.Rd man/getStudyDatasetInfo.Rd man/getStudyVariableData.Rd man/getStudyVariableInfo.Rd man/getStudyVariableInfoByDataType.Rd man/getStudyVariableInfoByTerms.Rd man/getVarNameAccCombos.Rd man/getVarNameByPhvAcc.Rd man/getVariableDataByPhvAcc.Rd man/getVariableDataByPhvAccAndSubjId.Rd man/getVariableInfoByPhvAcc.Rd man/initialize-Commons-method.Rd man/initialize-Study-method.Rd man/isStudyAcc.Rd man/manageArchive.Rd man/mergeDatasetConsent.Rd man/mergeDatasetConsentByStudy.Rd man/parseDataDic.Rd man/parseDataDicByStudy.Rd man/parseIdsFromPhtAcc.Rd man/parseIdsFromPhvAcc.Rd man/parseIdsFromStAcc.Rd man/parsePhenoFileMeta.Rd man/parsePhtHeaderFromFile.Rd man/prepareData.Rd man/prjConfig.Rd man/recordPrjFileInfo.Rd man/saveGapPlot.Rd man/searchCopyPhenoFiles.Rd man/show-Commons-method.Rd man/show-Study-method.Rd man/stripColNameAcc.Rd man/study_internal.Rd man/study_public.Rd man/variableBoxplot.Rd man/variableCorrelHeatmap.Rd man/variableHistogram.Rd man/variablePiechart.Rd man/variableScatterplot.Rd man/variableSummary.Rd man/variableVenndiagram.Rd man/viewAllDatasetInfo.Rd man/viewAllStudyInfo.Rd man/viewStudyVariableInfo.Rd man/writeFileInfoJson.Rd man/writeLog.Rd
vignettes/figure/VennDiagram_AGECT_phv00054139.v1_DT_PROA_phv00053796.v2_SYST07_phv00000089.v2.png
vignettes/figure/barchart_phv00053733.v2_ADVSTAT.png
vignettes/figure/boxplot_phv00000027.v2_AGEPHOT_phv00000032.v2_MARITAL.png
vignettes/figure/boxplot_phv00053764.v2_LPSC.png
vignettes/figure/correlmatrix_SCHOOL_phv00000035.v2_RCORBASE_phv00000007.v2_DT_LYC_phv00053794.v2_DT_VITE_phv00053786.v2_DIAS12_phv00000106.v2.png
vignettes/figure/histogram_phv00053747.v2_LNUCSCORE.png
vignettes/figure/scatterplot_phv00000027.v2_AGEPHOT_phv00053747.v2_LNUCSCORE_phv00053757.v2_RNUC.png
vignettes/introduction.R vignettes/introduction.Rmd
vignettes/introduction.html
vignettes/introduction.md
jameslhao/dbgapr_dev documentation built on Aug. 15, 2017, 11:22 p.m.