Files in jamesware/denovolyzeR
Statistical Analyses of De Novo Genetic Variants
.Rbuildignore
.gitignore
.travis.yml
DESCRIPTION
LICENSE.md
NAMESPACE
NEWS.md
R/FMRPgenes.doc.R
R/PermuteMultiHits.R
R/autismDeNovos.doc.R
R/denovolyze.R
R/denovolyzeMultiHits.R
R/denovolyzeR.doc.R
R/parseInput.R
R/sysdata.rda
R/viewProbabilityTable.R
README.Rmd
README.md
alternativeProbabilityTables/README_probTables.md
alternativeProbabilityTables/probTable_Samocha2014.rda
cran-comments.md
data-raw/CITATION
data-raw/PackageBuildWorkflow.R
data-raw/all_transcripts_pmut_July16.txt
data-raw/annotateMetaClasses.R
data-raw/annotated_asd_trios1078.txt
data-raw/aut_dnm_3.5.13.txt
data-raw/fixed_mut_prob_fs_adjdepdiv.txt
data-raw/fmrp_gencode.txt
data-raw/fmrp_list_edited.txt
data-raw/hgnc_annotated_depthadj_pmuts_fs_canonical_transcripts_div_Feb07.txt
data-raw/parseRawData.Rmd
data-raw/parseRawData.html
data-raw/probTable_gencode_reannotatedIDs.txt
data/FMRPgenes.rda
data/autismDeNovos.rda
denovolyzeR.Rproj
inst/CITATION
inst/doc/denovolyzeR_intro.R
inst/doc/denovolyzeR_intro.Rmd
inst/doc/denovolyzeR_intro.html
maintenance/bugReport_20160729.Rmd
maintenance/debugDplyrUpdate.R
maintenance/usefulForDebugging.R
man/PermuteMultiHits.Rd
man/autismDeNovos.Rd
man/denovolyze.Rd
man/denovolyzeMultiHits.Rd
man/denovolyzeR.Rd
man/fmrpGenes.Rd
man/parseInput.Rd
man/viewProbabilityTable.Rd
revdep/.gitignore
revdep/check.R
vignettes/denovolyzeR_intro.Rmd
