repsapply: A more general version of avereps

In january3/myfuncs: loads a few functions I often need

Description

A more general version of avereps

Usage

repsapply(x, ID, colwise = TRUE, func = mean)

Arguments

x	a numeric matrix
ID	function will be applied to replicates with the same ID
colwise	If TRUE, then for each column, the function will be applied to rows with identical IDs. If FALSE, then for each row, the function will be applied to columns with identical IDs.
func	the function to be applied

Details

Just like avereps averages the expression value for each sample for genes that have the same ID, repsapply applies any arbitrary function.

january3/myfuncs documentation built on April 1, 2020, 4:42 a.m.