outputFeatureEIC: outputFeatureEIC

In jaspershen/metflow2: Comprehensitive tools for metabolomics data processing and data analysis

Description

Output EICs of all peaks in peak table.

Usage

outputFeatureEIC(
  object,
  feature.index = 1,
  polygon = TRUE,
  save.plot = TRUE,
  path = ".",
  file.type = c("pdf", "png"),
  plot.name = "peak_plot",
  width = 7,
  height = 7,
  interactive.plot = FALSE,
  return.plot = TRUE,
  message = TRUE
)

Arguments

object	xdata class object from dataProcessing.
feature.index	Which feature to output. Index.
polygon	Add polygon or not.
save.plot	Save plot or not.
path	Work directory.
file.type	pdf or png.
plot.name	The name of plot.
width	Width.
height	Height.
interactive.plot	Interactive or not.
return.plot	Return plot or not.
message	Show message or not.

Value

ggplot object.

Author(s)

Xiaotao Shen [e-mail]

jaspershen/metflow2 documentation built on Aug. 15, 2021, 4:38 p.m.