plot3d.cmtkreg: Plot the domain of a CMTK registration

In jefferis/nat: NeuroAnatomy Toolbox for Analysis of 3D Image Data

Plot the domain of a CMTK registration

Description

Plot the domain of a CMTK registration

Usage

## S3 method for class 'cmtkreg'
plot3d(x, ..., gridlines = FALSE, plotengine = getOption("nat.plotengine"))

Arguments

x	A cmtk registration (the path to the registration folder on disk) or the resulting of reading one in with read.cmtkreg.
...	Additional arguments passed to plot3d
gridlines	Whether to display gridlines when using plotly as the backend plotting engine (default: FALSE)
plotengine	the plotting backend engine to use either 'rgl' or 'plotly'.

See Also

cmtkreg, read.cmtkreg, plot3d

Examples

testdatadir=system.file("tests/testthat/testdata/cmtk", package="nat")
regpath=file.path(testdatadir,'FCWB_JFRC2_01_warp_level-01.list/')
# only run this if file is present (not always installed)
if(file.exists(regpath)){
plot3d(cmtkreg(regpath))

# or read registration into memory if you want to work with it
reg=read.cmtkreg(regpath)
plot3d(reg)
}

jefferis/nat documentation built on Oct. 17, 2024, 2:48 p.m.