API for jefferys/FusionExpressionPlot
Plot Expression Profiles for Fused Genes
| Global functions | |
|---|---|
| .grGetChr | Source code |
| .grGetStrand | Source code |
| FusionExpressionPlot | Man page |
| FusionExpressionPlot-package | Man page |
| addExonExpression | Man page Source code |
| demo.getFusionExpressionPlotData | Source code |
| demo.getFusionExpressionPlotData1 | Source code |
| demo.getFusionExpressionPlotData2 | Source code |
| demo.getFusionExpressionPlotData4 | Source code |
| demo.grToRect | Source code |
| demo.makeGrForTest | Source code |
| demo.makeGrForTmprss2 | Source code |
| demo.plotFusionExpressionPlotData | Source code |
| demo.plotFusionExpressionPlotData1 | Source code |
| demo.plotFusionExpressionPlotData2 | Source code |
| demo.plotFusionExpressionPlotData4 | Source code |
| demo.pointToPoly | Source code |
| do.allPlots | Man page Source code |
| do.plots | Man page Source code |
| expressionGrLabelMap | Source code |
| extractGeneModels | Man page Source code |
| extractTranscriptModels | Man page Source code |
| filterFusions | Man page Source code |
| genomicToModelCoordinates | Man page Source code |
| getCandidateFusions | Man page |
| getCohortExonExpressionData | Man page |
| getFusionExpressionPlotData | Man page Source code |
| getMapSpliceCohortFusionData | Man page Source code |
| grAddColumn | Man page Source code |
| grFromCohortDf | Man page Source code |
| grFromElementString | Man page Source code |
| grFromLocationString | Man page Source code |
| grNew | Man page Source code |
| grToElementString | Man page Source code |
| grToLocationString | Man page Source code |
| grToRect | Man page |
| is.safeFileName | Man page Source code |
| loadCohortDefinition | Man page |
| loadExonExpressionFile | Man page |
| loadGafModels | Man page |
| mapColors | Man page Source code |
| mapLabels | Man page Source code |
| normExpressionData | Man page Source code |
| plotFusionExpressionOne | Man page Source code |
| plotFusionExpressionPair | Man page Source code |
| plotFusionExpressionPlotData | Man page |
| plotGeneExpression | Man page Source code |
| pointToPoly | Man page |
| regexprNamedMatches | Man page Source code |
| slurp | Man page Source code |
| templateFill | Man page Source code |
| test_is | Source code |
| test_ok | Source code |
