convert_onemap: Generate diaQTL input files from OneMap

In jendelman/diaQTL: QTL Analysis in Diallel Populations

Generate diaQTL input files from OneMap

Description

Generate diaQTL input files from 'onemap_progeny_haplotypes' object class of OneMap R package (version >2.2.0)

Usage

convert_onemap(data, digits = 4, outstem = "")

Arguments

data	onemap_progeny_haplotypes object class
digits	how many rounding digits for the probabilities output (default=4)
outstem	prefix for the pedigree and genotype files for diaQTL

Examples

## Not run: 
    map <- list(LG1_final, LG2_final)
    progeny_haplot <- onemap::progeny_haplotypes(map,
                                                 most_likely = FALSE,
                                                 ind = "all")
    convert_onemap(progeny_haplot)

## End(Not run)

jendelman/diaQTL documentation built on Jan. 27, 2024, 6:39 a.m.