diplo_freq: Diplotype frequencies
In jendelman/diaQTL: QTL Analysis in Diallel Populations
diplo_freq R Documentation
Diplotype frequencies
Description
Plot the frequency of individuals with diplotype dosage above a threshold
Usage
diplo_freq(data, diplotypes, dosage, position, chrom = NULL)
Arguments
data
Variable inheriting from class diallel_geno
diplotypes
Names of diplotypes
dosage
Dosage threshold
position
Either "cM" or "bp" for plotting
chrom
Names of chromosomes (default is all)
Details
Useful for visualizing selection in selfed populations.
Value
List containing
- result
Data frame with the map and frequency
- plot
ggplot object
jendelman/diaQTL documentation built on Jan. 27, 2024, 6:39 a.m.
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| diplo_freq | R Documentation |
Diplotype frequencies
Description
Plot the frequency of individuals with diplotype dosage above a threshold
Usage
diplo_freq(data, diplotypes, dosage, position, chrom = NULL)
Arguments
data |
Variable inheriting from class |
diplotypes |
Names of diplotypes |
dosage |
Dosage threshold |
position |
Either "cM" or "bp" for plotting |
chrom |
Names of chromosomes (default is all) |
Details
Useful for visualizing selection in selfed populations.
Value
List containing
- result
Data frame with the map and frequency
- plot
ggplot object
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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