Files in jennylsmith/fusBreakpoint
Find fusion exon junction sequence reads from RNAseq BAM files

.Rbuildignore

.gitignore

.travis.yml

DESCRIPTION

NAMESPACE

NEWS.md R/exon_annotation_functions.R R/fusBreakpoint-package.R R/seq_searches_workflow.R R/survplot_functions.R R/utils-pipe.R README.md

fusBreakpoint.Rproj

man/SurvivalPlot.Rd man/calc_KMcurve_pvalues.Rd man/coxSummaryTable.Rd man/create_custom_pdict.Rd man/define_exon_junctions.Rd man/examine_breakpoint_evidence.Rd man/fusion_category.Rd man/genome_paint_format.Rd man/match_reads_contigs.Rd man/mcol_intron_rank.Rd man/order_breakpoints.Rd man/outcome_table.Rd man/pipe.Rd man/risk.table.Rd man/subset_bam.Rd tests/testthat.R tests/testthat/test-example.r vignettes/Annotate_and_Summary_Stats_Breakpoint_Evidence.Rmd vignettes/Multiple_Samples_with_RSlurm_and_Future.Rmd

jennylsmith/fusBreakpoint documentation built on Oct. 7, 2021, 8:04 p.m.

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