mcol_intron_rank: Add Intron Rank Column to GRanges containing gene introns
In jennylsmith/fusBreakpoint: Find fusion exon junction sequence reads from RNAseq BAM files
Description
Usage
Arguments
Examples
View source: R/exon_annotation_functions.R
Description
Add Intron Rank Column to GRanges containing gene introns
Usage
1
mcol_intron_rank(intron_GR)
Arguments
intron_GR
GRanges list object that contains intron ranges of genes involved in the fusions in the input dataframe
Examples
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## Not run:
intronGR <- intronsByTranscript(Grch37.txdb, use.names=TRUE)
update.intronGR <- mcol_intron_rank(intronGR)
## End(Not run)
jennylsmith/fusBreakpoint documentation built on Oct. 7, 2021, 8:04 p.m.
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Description Usage Arguments Examples
View source: R/exon_annotation_functions.R
Description
Add Intron Rank Column to GRanges containing gene introns
Usage
1 | mcol_intron_rank(intron_GR)
|
Arguments
intron_GR |
GRanges list object that contains intron ranges of genes involved in the fusions in the input dataframe |
Examples
1 2 3 4 5 | ## Not run:
intronGR <- intronsByTranscript(Grch37.txdb, use.names=TRUE)
update.intronGR <- mcol_intron_rank(intronGR)
## End(Not run)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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