order_breakpoints: Order breakpoints Numerically for harmonization steps
In jennylsmith/fusBreakpoint: Find fusion exon junction sequence reads from RNAseq BAM files
Description
Usage
Arguments
Examples
View source: R/exon_annotation_functions.R
Description
Order breakpoints Numerically for harmonization steps
Usage
1
order_breakpoints(brkpt, sep = "|")
Arguments
brkpt
the column name containing the breakpoint position
sep
the seperator between the two breakpoints
Examples
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## Not run:
fusion.df <- data.frame(geneNameA="NUP98", geneNameB="KDM5A", Breakpoint="chr12:0000000|chr11:0000000") %>%
rowwise() %>%
mutate(Breakpoint.Ordered=order_breakpoints(Breakpoint)) %>%
ungroup()
## End(Not run)
jennylsmith/fusBreakpoint documentation built on Oct. 7, 2021, 8:04 p.m.
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Description Usage Arguments Examples
View source: R/exon_annotation_functions.R
Description
Order breakpoints Numerically for harmonization steps
Usage
1 | order_breakpoints(brkpt, sep = "|")
|
Arguments
brkpt |
the column name containing the breakpoint position |
sep |
the seperator between the two breakpoints |
Examples
1 2 3 4 5 6 7 8 | ## Not run:
fusion.df <- data.frame(geneNameA="NUP98", geneNameB="KDM5A", Breakpoint="chr12:0000000|chr11:0000000") %>%
rowwise() %>%
mutate(Breakpoint.Ordered=order_breakpoints(Breakpoint)) %>%
ungroup()
## End(Not run)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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