fusion_category: Define Fusion Category for Harmonization Steps

In jennylsmith/fusBreakpoint: Find fusion exon junction sequence reads from RNAseq BAM files

Description

Define Fusion Category for Harmonization Steps

Usage

fusion_category(geneA, geneB)

Arguments

geneA	column name which contains the gene symbol for fusion partner A
geneB	column name which contains the gene symbol for fusion partner A

Examples

## Not run: 
fusion.df <- data.frame(geneNameA="NUP98", geneNameB="KDM5A", Breakpoint="chr11:0000000|chr12:0000000") %>%
 rowwise() %>%
 mutate(Fusion.Category=fusion_category(geneNameA, geneNameB)) %>%
 ungroup()

## End(Not run)

jennylsmith/fusBreakpoint documentation built on Oct. 7, 2021, 8:04 p.m.