replace_deaths_id: Replace NBS ID in Surveillance Deaths Linelist with...

In jesse-smith/coviData: COVID-19 Data Munging Tools for the Shelby County Health Department

Replace NBS ID in Surveillance Deaths Linelist with Standardized ID

Description

replace_deaths_id() facilitates comparison of the surveillance deaths linelist with the one exported from NBS by standardizing patient IDs. It saves the result in the file specified in save_as.

Usage

replace_deaths_id(
  file = "Working Copy Death  Epi.xlsx",
  directory = "V:/EPI DATA ANALYTICS TEAM/MORTALITY DATA/",
  id = NULL,
  save_as = paste0("sas_data/cleaned_surveillance_copy.xlsx")
)

Arguments

file	The name of the surveillance linelist file
directory	The directory containing the linelist
id	The name of the column specifying the NBS ID in the linelist; if NULL, assumes that this is the first column
save_as	The file path specifying where to save the results

Value

The cleaned data as a tibble (invisibly)

jesse-smith/coviData documentation built on Jan. 14, 2023, 11:08 a.m.