readTrackMateXML: read TrackMate XML output files
In jgodet/trackR: R tools and functions to compute jump analysis, describe and infer from single-molecule tracking data
Description
Usage
Arguments
Value
Author(s)
Examples
View source: R/readTrackMateXML.r
Description
read TrackMate XML output files
Usage
1
readTrackMateXML(XMLpath, multiCore = TRUE)
Arguments
XMLpath
path to the xml file
multiCore
use multi-cores (boolean)
Value
data frame
Author(s)
JuG
Examples
1
2
3
4
5
6
7
xmlPath <- "/Users/jgodet/Seafile/MaBibliotheque/Code/TrackMate/nmeth.2808-sv1.xml"
system.time(
data <- readTrackMateXML(XMLpath = xmlPath)
)
data <- readTrackMateXML(XMLpath = xmlPath, multiCore = FALSE)
data$jump<-jump(data, spaceRes=1)
hist(data$jump, breaks=150)
jgodet/trackR documentation built on May 24, 2020, 2:21 p.m.
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Description Usage Arguments Value Author(s) Examples
View source: R/readTrackMateXML.r
Description
read TrackMate XML output files
Usage
1 | readTrackMateXML(XMLpath, multiCore = TRUE)
|
Arguments
XMLpath |
path to the xml file |
multiCore |
use multi-cores (boolean) |
Value
data frame
Author(s)
JuG
Examples
1 2 3 4 5 6 7 | xmlPath <- "/Users/jgodet/Seafile/MaBibliotheque/Code/TrackMate/nmeth.2808-sv1.xml"
system.time(
data <- readTrackMateXML(XMLpath = xmlPath)
)
data <- readTrackMateXML(XMLpath = xmlPath, multiCore = FALSE)
data$jump<-jump(data, spaceRes=1)
hist(data$jump, breaks=150)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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