Files in jhart99/gseasier
Run the GSEA java pacakage from inside R
.Rbuildignore
.gitignore
.lintr
CODE_OF_CONDUCT.md
DESCRIPTION
LICENSE
NAMESPACE
R/ES.R
R/ES.plot.R
R/FES.R
R/FES.plot.R
R/FES.plot.vs.R
R/FES.summary.R
R/FES.table.R
R/compare.sigs.R
R/convert.sigs.to.matrix.R
R/fes.cmp.R
R/filter.cpm.R
R/find.gsea.results.R
R/gsea.java.exec.R
R/gsea.preranked.java.exec.R
R/jitter.sn.R
R/leading.edge.R
R/leading.edge.heatmap.R
R/msigdb.R
R/noise.rank.R
R/ragged.list.melt.R
R/read.cls.R
R/read.gct.R
R/read.gsea.results.R
R/s2n.rank.R
R/s2n.score.R
R/set.gsea.R
R/write.cls.R
R/write.gct.R
R/write.gmt.R
R/write.sn.rnk.R
R/z.rank.R
R/z.ratio.R
README.md
gsea-test.R
gsea.sigs.test.R
gseasier.Rproj
man/ES.Rd
man/ES.plot.Rd
man/FES.Rd
man/FES.plot.Rd
man/FES.plot.vs.Rd
man/FES.summary.Rd
man/FES.table.Rd
man/GSEA.java.exec.Rd
man/GSEA.preranked.java.exec.Rd
man/compare.sigs.Rd
man/convert.sigs.to.matrix.Rd
man/filter.cpm.Rd
man/find.gsea.results.Rd
man/gsea.pkg.env.Rd
man/hello.Rd
man/jitter.sn.Rd
man/leading.edge.Rd
man/leading.edge.heatmap.Rd
man/loadSig.Rd
man/noise.rank.Rd
man/ragged.list.melt.Rd
man/read.cls.Rd
man/read.gct.Rd
man/read.gsea.results.Rd
man/s2n.rank.Rd
man/s2n.score.Rd
man/write.cls.Rd
man/write.gct.Rd
man/write.gmt.Rd
man/z.rank.Rd
man/z.ratio.Rd
