loadSig: Loads signatures from GMT formatted files from msigdb
In jhart99/gseasier: Run the GSEA java pacakage from inside R
Description
Usage
Arguments
Value
Examples
Description
Loads signatures from GMT formatted files from msigdb
Usage
1
loadSig(filename, path = ".")
Arguments
filename
The GMT file to read
path
The path to the GMT file
Value
A data frame of the signatures, signature class, definitions, and genes.
Examples
1
sigs <- loadSigs("test.gmt", ".")
jhart99/gseasier documentation built on May 20, 2019, 8:31 a.m.
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Description Usage Arguments Value Examples
Description
Loads signatures from GMT formatted files from msigdb
Usage
1 | loadSig(filename, path = ".")
|
Arguments
filename |
The GMT file to read |
path |
The path to the GMT file |
Value
A data frame of the signatures, signature class, definitions, and genes.
Examples
1 | sigs <- loadSigs("test.gmt", ".")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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