jingwyang/AnceTran: the R package for analyzing TF-binding evolution based on ChIP-seq data

AnceTran is an R package that can perform comparative TF-binding evolution analysis based on the ChIP-seq data, which includes optimized input formatting, normalization, pairwise TF-binding distance estimation, TF-binding character tree building and ancestral TF-binding state inference.

Getting started

Package details

MaintainerJingwen Yang <[email protected]>
LicenseGPL-3
Version2.0.0
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("jingwyang/AnceTran")
jingwyang/AnceTran documentation built on Nov. 8, 2018, 3:38 p.m.