plotallo: Plot allometric deformation

In jinyung/otolith: Identification of fish otolith using digital images

Description

A wrapper function to draw min, mean, and max shape of a species out of all configurations of selected group. Min and max shapes are displayed as TPS deformations from the mean shape

Usage

plotallo(gpa, group, target, col = 1, main, n = 40, saveplot = FALSE,
  plotsize = 1300)

Arguments

gpa	a rGPA object
group	factor giving the groupings, must be in same order as A of rGPA object
target	character. group that you want to draw, one of the level of group
main	character. title of the plot. default is using the target
n	numeric. no. of grids used in TPS visualization, argument passed to tps
col	color of the outline
saveplot	logical. Whether to save the plot. No plot will be displayed in window if saveplot=TRUE
plotsize	width of the plot in pixel. Used only when saveplot=TRUE

Value

just the plot

jinyung/otolith documentation built on May 19, 2019, 10:36 a.m.