Description Usage Arguments Value See Also
A wrapper function to do the routine of reading the files
from imagej output (from runmacro
) and
combine the descriptor files into a single file.
1 2 |
imagejdir |
path of the folder containing the shape descriptor files. if not given, a GUI folder selector will prompt user to select (if run in Windows) |
write |
logical. whether to save a new file of combined descriptor. |
plot |
logical. whether to plot PCA for preliminary assessment of descriptor data. Only graphical output of first 3 PCs. |
label |
logical. Whether to extract label from the image file name. |
extract |
a numeric vector of two number telling
which characters to extract from the file name to become
the species name, if |
A dataframe of combined shape descriptor data
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