read.gap: Illustrative function to read GAP output.
In jjellis/GenomicVis: Genomic Visualisation Routines

This function is provided as an example of reading output from GAP and creating the required data.frame for cnv.plot.

1	read.gap(file, annot, sample.id = NULL)

`file`	GAP output file
`annot`	GAP output annotation file
`sample.id`	The name of the sample to process

A data.frame instance that can be used as input for cnv.plot.

Jonathan Ellis <jonathan.j.ellis@gmail.com>

## Not run: 
read.gap()

## End(Not run)

jjellis/GenomicVis documentation built on May 19, 2019, 11:39 a.m.

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README.md WGS Genomic Visualisation

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