read.fastq: Function to read in fastq files

Description Usage Arguments Details Value Author(s)

View source: R/utility.R

Description

Function to read in fastq files

Usage

1
read.fastq(path, nlines = 0)

Arguments

path

path to the fastq file

nlines

number of lines to read in

Details

Function to read in fastq files

Value

A list containing the following elements:

ids

The ids of the reads i.e. the names of the reads

reads

The read as character

phreds

The phreds scores per read as character

Author(s)

Klaus Jung


jkruppa/acgtPyramid documentation built on May 19, 2019, 12:45 p.m.