| adjustAxisLabelMargins | Adjust axis label margins |
| alpha2col | set R color alpha value |
| applyCLrange | Apply CL color range |
| applyXlsxCategoricalFormat | Add categorical colors to 'Excel' 'xlsx' worksheets |
| applyXlsxConditionalFormat | Xlsx Conditional formatting |
| asDate | convert date DDmmmYYYY to Date |
| asSize | convert numeric value or R object to human-readable size |
| breakDensity | Calculate more detailed density of numeric values |
| breaksByVector | break a vector into groups |
| call_fn_ellipsis | Safely call a function using ellipsis |
| cell_fun_label | ComplexHeatmap cell function to label heatmap cells |
| checkLightMode | check lightMode for light background color |
| check_pkg_installed | Lightweight method to check if an R package is installed |
| col2alpha | get R color alpha value |
| col2hcl | convert R color to HCL color matrix |
| col2hsl | convert R color to HSL color matrix |
| col2hsv | Convert R color to HSV matrix |
| colNum2excelName | convert column number to 'Excel' column name |
| color2gradient | Make a color gradient |
| color_dither | Make dithered color pattern light-dark |
| coordPresets | Process coordinate adjustment presets |
| cPaste | paste a list into a delimited vector |
| dateToDaysOld | convert date to age in days |
| decideMfrow | Decide plot panel rows, columns for graphics::par(mfrow) |
| deg2rad | Convert degrees to radians |
| drawLabels | Draw text labels on a base R plot |
| exp2signed | exponentiate log2 values with directionality |
| fillBlanks | Fill blank entries in a vector |
| fixYellow | Fix yellow color |
| fixYellowHue | Fix yellow color hue |
| formatInt | Format an integer as a string |
| getAxisLabel | Get axis label for minorLogTicks |
| getColorRamp | get color ramp by name, color, or function |
| getDate | get simple date string |
| getPlotAspect | Get aspect ratio for coordinates, plot, or device |
| grepls | Search for objects in the environment |
| groupedAxis | Draw grouped axis labels |
| gsubOrdered | Global substitution into ordered factor |
| gsubs | Pattern replacement with multiple patterns |
| handleArgsText | Handle function arguments as text |
| hcl2col | convert HCL to R color |
| heads | Apply head() across each element in a list of vectors |
| heatmap_column_order | Return Heatmap column order from ComplexHeatmap heatmap... |
| heatmap_row_order | Return Heatmap row order from ComplexHeatmap heatmap object |
| hsl2col | convert HCL to R color |
| hsv2col | Convert HSV matrix to R color |
| igrep | case-insensitive grep |
| igrepHas | vector contains any case-insensitive grep match |
| igrepl | case-insensitive logical grepl |
| imageByColors | Display color raster image using a matrix of colors |
| imageDefault | Display a color raster image |
| isColor | detect valid R color |
| isFALSEV | Vectorized isFALSE |
| isTRUEV | Vectorized isTRUE |
| jamba-package | jamba: Jam Base Methods |
| jamCalcDensity | Calculate scatter plot point density |
| jam_rapply | Jam-specific recursive apply |
| jargs | Show R function arguments jam-style |
| kable_coloring | Extend kableExtra colorization of 'Rmarkdown' tables |
| list2df | Convert list of vectors to data.frame with item, value, name |
| lldf | Long listing of R session objects |
| log2signed | log2 transformation with directionality |
| makeColorDarker | make R colors darker (or lighter) |
| make_html_styles | vectorized make_styles for html span output |
| makeNames | make unique vector names |
| make_styles | vectorized make_styles for crayon output |
| mergeAllXY | Merge list of data.frames retaining all rows |
| middle | Return the middle portion of data similar to head and tail |
| minorLogTicks | Calculate major and minor tick marks for log-scale axis |
| minorLogTicksAxis | Display major and minor tick marks for log-scale axis |
| mixedOrder | order alphanumeric values keeping numeric values in proper... |
| mixedSort | sort alphanumeric values keeping numeric values in proper... |
| mixedSortDF | sort data.frame keeping numeric values in proper order |
| mixedSorts | sort alphanumeric values within a list format |
| mmixedOrder | order alphanumeric values from a list |
| nameVector | assign unique names for a vector |
| nameVectorN | define a named vector using vector names |
| newestFile | Return the newest file from a vector of files |
| noiseFloor | Apply noise floor and ceiling to numeric vector |
| normScale | Scale a numeric vector from 0 to 1 |
| nullPlot | Create a blank plot with optional labels |
| padInteger | prefix integers with leading zeros |
| padString | pad a character string to a fixed length |
| pasteByRow | Paste data.frame rows into character vector |
| pasteByRowOrdered | Paste data.frame rows into an ordered factor |
| plotPolygonDensity | Plot distribution and histogram overlay |
| plotRidges | Plot ridges density plots for numeric matrix input |
| plotSmoothScatter | Smooth scatter plot with enhancements |
| printDebug | print colorized output to R console |
| provigrep | provigrep: progressive case-insensitive value-grep |
| rad2deg | Convert radians to degrees |
| rainbow2 | Simple rainbow palette replacement |
| rbindList | rbind a list of vectors into matrix or data.frame |
| readOpenxlsx | Import one or more data.frame from 'Excel' 'xlsx' format |
| relist_named | relist a vector which allows re-ordered names |
| reload_rmarkdown_cache | Reload 'Rmarkdown' cache |
| renameColumn | Rename columns in a data.frame, matrix, tibble, or GRanges... |
| rgb2col | Convert RGB color matrix to R color |
| rlengths | lengths for recursive lists |
| rmInfinite | remove Infinite values |
| rmNA | remove NA values |
| rmNAs | remove NA values from list elements |
| rmNULL | remove NULL entries from list |
| rowGroupMeans | Calculate row group means, or other statistics |
| rowRmMadOutliers | Remove outlier points per row by MAD factor threshold |
| sclass | return the classes of a list of objects |
| sdim | print dimensions of list object elements |
| setCLranges | Get Chroma and Luminance ranges for the given lightMode |
| setPrompt | set R prompt with project name and R version |
| setTextContrastColor | Define visible text color |
| set_xlsx_colwidths | Set column widths in Xlsx files |
| set_xlsx_rowheights | Set row heights in Xlsx files |
| shadowText | Draw text with shadow border |
| shadowText_options | Get and set options for shadowText |
| showColors | Show colors from a vector or list |
| sizeAsNum | convert size to numeric value |
| smoothScatterJam | Smooth scatter plot, Jam style |
| sqrtAxis | Determine square root axis tick mark positions |
| tcount | frequency of entries, ordered by frequency |
| ucfirst | Uppercase the first letter in each word |
| unalpha | Remove alpha transparency from colors |
| unigrep | case-insensitive grep, returning unmatched indices |
| uniques | apply unique to each element of a list |
| unnestList | Un-nest a nested list into a simple list |
| unvigrep | case-insensitive grep, returning unmatched values |
| usrBox | Draw colored box indicating R plot space |
| vgrep | grep, returning values |
| vigrep | case-insensitive grep, returning values |
| warpAroundZero | Warp a vector of numeric values relative to zero |
| warpRamp | Warp colors in a color ramp |
| writeOpenxlsx | Export a data.frame to 'Excel' 'xlsx' format |
