API for jmw86069/splicejam
Analysis and Visualization of Gene Splice Variants and Transcriptome Data

Global functions
StatDiagonalWideArc Man page
addGRLgaps Man page
addGRgaps Man page
ale2violin Man page
annotateGRLfromGRL Man page
annotateGRfromGR Man page
assignGRLexonNames Man page
bgaPlotly3d Man page
closestExonToJunctions Man page
codonUsage2df Man page
combineGRcoverage Man page
compressPolygonM Man page
curateDFtoDF Man page
curateVtoDF Man page
defineDetectedTx Man page
detectedTxInfo Man page
df2colorSub Man page
dfWide2segments Man page
dna2codon Man page
escapeWhitespaceRegexp Man page
exoncov2polygon Man page
factor2label Man page
findOverlapsGRL Man page
flattenExonsBy Man page
gene2gg Man page
geom_diagonal_wide_arc Man page
geomean Man page
getFirstStrandedFromGRL Man page
getGRLgaps Man page
getGRcoverageFromBw Man page
getGRgaps Man page
grl2df Man page
groups2contrasts Man page
import_juncs_from_bed Man page
intercalate Man page
internal_junc_score Man page
jamCai Man page
jamGeomean Man page
jitter_norm Man page
launchSashimiApp Man page
list2im Man page
makeTx2geneFromGtf Man page
make_ref2compressed Man page
plotSashimi Man page
prepareSashimi Man page
psl2df Man page
runDiffSplice Man page
sashimiAppConstants Man page
sashimiAppServer Man page
sashimiAppUI Man page
shrinkMatrix Man page
simplifyXY Man page
sortGRL Man page
sortSamples Man page
spliceGR2junctionDF Man page
splicejam-extensions Man page
spline3d Man page
stackJunctions Man page
stat_diagonal_wide_arc Man page
strsplitOrdered Man page
test_cov_gr Man page
test_cov_wide_gr Man page
test_exon_gr Man page
test_exon_wide_gr Man page
test_junc_gr Man page
test_junc_wide_gr Man page
to_basic.GeomShape Man page
tx2ale Man page
jmw86069/splicejam documentation built on April 7, 2020, 12:06 p.m.