trim_variables: Remove low quality genes
In johannesnicolaus/ASURAT_source: Assisting Interpretable Classifications in Single-cell Transcriptomics
Description
Usage
Arguments
Value
Examples
Description
Remove low quality genes based on the number of mean read counts across all cells
Usage
1
trim_variables(obj, min_meanReads)
Arguments
obj
ASURAT object.
min_meanReads
Minimal mean read counts per gene across all cells.
Value
ASURAT object.
Examples
1
trim_variables(obj = pbmc_4000, min_meanReads = 0.05)
johannesnicolaus/ASURAT_source documentation built on Dec. 21, 2021, 2:11 a.m.
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Description Usage Arguments Value Examples
Description
Remove low quality genes based on the number of mean read counts across all cells
Usage
1 | trim_variables(obj, min_meanReads)
|
Arguments
obj |
ASURAT object. |
min_meanReads |
Minimal mean read counts per gene across all cells. |
Value
ASURAT object.
Examples
1 | trim_variables(obj = pbmc_4000, min_meanReads = 0.05)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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