API for jokergoo/ComplexHeatmap
Make Complex Heatmaps

Global functions
%v%	Man page
+.AdditiveUnit	Man page
.is_abs_unit.default	Source code
.is_abs_unit.unit	Source code
.is_abs_unit.unit.arithmetic	Source code
.is_abs_unit.unit.list	Source code
.onAttach	Source code
.pointsGrob_as_a_list	Source code
AdditiveUnit	Man page Source code
AdditiveUnit-class	Man page
AnnotationFunction	Man page Source code
AnnotationFunction-class	Man page
ColorMapping	Man page Source code
ColorMapping-class	Man page
ComplexHeatmap-package	Man page
Extract.AnnotationFunction	Man page
Extract.Heatmap	Man page
Extract.HeatmapAnnotation	Man page
Extract.HeatmapList	Man page
Extract.SingleAnnotation	Man page
Extract.comb_mat	Man page
Extract.gridtext	Man page
Heatmap	Man page Source code
Heatmap-class	Man page
Heatmap3D	Man page Source code
HeatmapAnnotation	Man page Source code
HeatmapAnnotation-class	Man page
HeatmapList	Man page Source code
HeatmapList-class	Man page
Legend	Man page Source code
Legends	Man page Source code
Legends-class	Man page
R_binary	Source code
SingleAnnotation	Man page Source code
SingleAnnotation-class	Man page
UpSet	Man page Source code
[.AnnotationFunction	Man page
[.Heatmap	Man page
[.HeatmapAnnotation	Man page
[.HeatmapList	Man page
[.SingleAnnotation	Man page
[.comb_mat	Man page
[.gridtext	Man page
add.AdditiveUnit	Man page
add_heatmap	Man page
add_heatmap,Heatmap-method	Man page
add_heatmap,HeatmapAnnotation-method	Man page
add_heatmap,HeatmapList-method	Man page
add_horizon_polygon	Source code
add_luminance	Source code
add_vp_name	Source code
adjust_dend_by_x	Man page Source code
adjust_heatmap_list	Man page
adjust_heatmap_list,HeatmapList-method	Man page
alter_graphic	Man page Source code
anno_barplot	Man page Source code
anno_block	Man page Source code
anno_boxplot	Man page Source code
anno_customize	Man page Source code
anno_density	Man page Source code
anno_empty	Man page Source code
anno_histogram	Man page Source code
anno_horizon	Man page Source code
anno_image	Man page Source code
anno_joyplot	Man page Source code
anno_lines	Man page Source code
anno_link	Man page Source code
anno_mark	Man page Source code
anno_numeric	Man page Source code
anno_oncoprint_barplot	Man page Source code
anno_points	Man page Source code
anno_simple	Man page Source code
anno_summary	Man page Source code
anno_text	Man page Source code
anno_textbox	Man page Source code
anno_type	Source code
anno_width_and_height	Source code
anno_zoom	Man page Source code
annotation_axis_grob	Man page Source code
annotation_legend_size	Man page
annotation_legend_size,HeatmapList-method	Man page
attach_annotation	Man page
attach_annotation,Heatmap-method	Man page
bar3D	Man page Source code
bin_genome	Man page Source code
binaryToInt	Source code
box_overlap	Source code
c.ColorMapping	Man page Source code
c.HeatmapAnnotation	Man page Source code
c.list	Source code
calc_after_h	Source code
calc_after_w	Source code
calc_before_h	Source code
calc_before_w	Source code
calc_ht_h	Source code
calc_ht_w	Source code
calc_legends_max_height	Source code
calc_legends_max_width	Source code
can_both_subset	Source code
check_gp	Source code
cluster_between_groups	Man page Source code
cluster_within_group	Man page Source code
colorRamp2_biv	Source code
color_mapping_legend	Man page
color_mapping_legend,ColorMapping-method	Man page
columnAnnotation	Man page Source code
column_dend	Man page
column_dend,Heatmap-method	Man page
column_dend,HeatmapList-method	Man page
column_order	Man page
column_order,Heatmap-method	Man page
column_order,HeatmapList-method	Man page
comb_degree	Man page Source code
comb_name	Man page Source code
comb_size	Man page Source code
combn	Source code
compare_heatmap	Man page Source code
compare_heatmap.2	Man page Source code
compare_pheatmap	Man page Source code
complement_size	Man page Source code
component_height	Man page
component_height,Heatmap-method	Man page
component_height,HeatmapList-method	Man page
component_width	Man page
component_width,Heatmap-method	Man page
component_width,HeatmapList-method	Man page
construct_axis_grob	Source code
construct_dend_segments	Source code
copy_all	Man page
copy_all,AnnotationFunction-method	Man page
copy_all,SingleAnnotation-method	Man page
cut_dendrogram	Source code
decorate_annotation	Man page Source code
decorate_column_dend	Man page Source code
decorate_column_names	Man page Source code
decorate_column_title	Man page Source code
decorate_dend	Man page Source code
decorate_dimnames	Man page Source code
decorate_heatmap_body	Man page Source code
decorate_row_dend	Man page Source code
decorate_row_names	Man page Source code
decorate_row_title	Man page Source code
decorate_title	Man page Source code
default_axis_param	Man page Source code
default_col	Source code
default_get_type	Man page Source code
dend_branches_heights	Source code
dend_edit_node	Source code
dend_heights	Man page Source code
dend_node_apply	Source code
dend_xy	Man page Source code
dendrogramGrob	Man page Source code
densityHeatmap	Man page Source code
dev.null	Source code
dim.Heatmap	Man page Source code
discrete_legend_body	Source code
dist2	Man page Source code
draw	Man page
draw,AnnotationFunction-method	Man page
draw,Heatmap-method	Man page
draw,HeatmapAnnotation-method	Man page
draw,HeatmapList-method	Man page
draw,Legends-method	Man page
draw,SingleAnnotation-method	Man page
draw_annotation	Man page
draw_annotation,Heatmap-method	Man page
draw_annotation_legend	Man page
draw_annotation_legend,HeatmapList-method	Man page
draw_dend	Man page
draw_dend,Heatmap-method	Man page
draw_dimnames	Man page
draw_dimnames,Heatmap-method	Man page
draw_heatmap_body	Man page
draw_heatmap_body,Heatmap-method	Man page
draw_heatmap_in_jupyter	Source code
draw_heatmap_legend	Man page
draw_heatmap_legend,HeatmapList-method	Man page
draw_heatmap_list	Man page
draw_heatmap_list,HeatmapList-method	Man page
draw_legend	Source code
draw_title	Man page
draw_title,Heatmap-method	Man page
draw_title,HeatmapList-method	Man page
edit_vp_in_legend_grob	Source code
expand_mode	Source code
extract_comb	Man page Source code
format_genomic_coor	Source code
frequencyHeatmap	Man page Source code
full_comb_code	Man page Source code
generate_param_list_fun	Source code
getXY_in_parent_vp	Man page Source code
get_annotation_index	Source code
get_branches_heights	Source code
get_color_mapping_index	Source code
get_color_mapping_list	Man page
get_color_mapping_list,HeatmapAnnotation-method	Man page
get_dend_order	Source code
get_dist	Source code
get_figure_index	Source code
get_heatmap_index	Source code
get_last_ht	Source code
get_legend_param_list	Man page
get_legend_param_list,HeatmapAnnotation-method	Man page
get_oncoprint_index	Source code
get_row_annotation_index	Source code
get_text_just	Source code
grid.annotation_axis	Man page Source code
grid.boxplot	Man page Source code
grid.dendrogram	Man page Source code
grid.draw.Legends	Man page Source code
grid.text	Source code
grid.textbox	Man page Source code
gt_render	Man page Source code
guess_align_legend	Source code
guess_alter_fun_is_vectorized	Source code
has_AnnotationFunction	Source code
has_component	Source code
has_heatmap	Source code
has_heatmap_list_component	Source code
has_zoomed_anno_empty	Source code
heatmap	Source code
heatmap.2	Source code
heatmap_layout_index	Source code
heatmap_legend_size	Man page
heatmap_legend_size,HeatmapList-method	Man page
heatmap_list_layout_index	Source code
height.AnnotationFunction	Man page Source code
height.Heatmap	Man page Source code
height.HeatmapAnnotation	Man page Source code
height.HeatmapList	Man page Source code
height.Legends	Man page Source code
height.SingleAnnotation	Man page Source code
height<-.AnnotationFunction	Man page
height<-.HeatmapAnnotation	Man page
height<-.SingleAnnotation	Man page
heightAssign.AnnotationFunction	Man page
heightAssign.HeatmapAnnotation	Man page
heightAssign.SingleAnnotation	Man page
heightDetails.Legend	Source code
heightDetails.annotation_axis	Man page Source code
heightDetails.legend	Man page Source code
heightDetails.legend_body	Man page Source code
heightDetails.packed_legends	Man page Source code
heightDetails.textbox	Man page Source code
horizon_chart	Source code
horizontal_continuous_legend_body	Source code
ht_global_opt	Man page Source code
ht_opt	Man page Source code
ht_size	Man page Source code
increase_annotation_index	Source code
increase_color_mapping_index	Source code
increase_figure_index	Source code
increase_heatmap_index	Source code
increase_oncoprint_index	Source code
increase_row_annotation_index	Source code
intToBinary	Source code
is.na.expression	Source code
is_RStudio_current_dev	Source code
is_abs_unit	Man page Source code
is_abs_unit_v3	Source code
is_abs_unit_v4	Source code
is_diff_equal	Source code
is_fun_annotation	Source code
is_matrix_annotation	Source code
is_simple_annotation	Source code
is_under_jupyter	Source code
is_windows	Source code
ks_dist	Source code
ks_dist_1	Source code
ks_dist_pair	Source code
legend_body_from_grob	Source code
length.HeatmapAnnotation	Man page Source code
length.HeatmapList	Man page Source code
list_components	Man page Source code
list_to_matrix	Man page Source code
make_cluster	Source code
make_column_cluster	Man page
make_column_cluster,Heatmap-method	Man page
make_comb_mat	Man page Source code
make_comb_mat_from_list	Source code
make_comb_mat_from_matrix	Source code
make_layout	Man page
make_layout,Heatmap-method	Man page
make_layout,HeatmapList-method	Man page
make_row_cluster	Man page
make_row_cluster,Heatmap-method	Man page
map_to_colors	Man page
map_to_colors,ColorMapping-method	Man page
max_text_height	Man page Source code
max_text_width	Man page Source code
merge_dendrogram	Man page Source code
names.HeatmapAnnotation	Man page Source code
names.HeatmapList	Man page Source code
names.SingleAnnotation	Source code
names<-.HeatmapAnnotation	Man page
namesAssign.HeatmapAnnotation	Man page
ncol.Heatmap	Man page Source code
nobs.AnnotationFunction	Man page Source code
nobs.HeatmapAnnotation	Man page Source code
nobs.SingleAnnotation	Man page Source code
normalize_comb_mat	Man page Source code
normalize_genomic_signals_to_bins	Man page Source code
normalize_graphic_param_to_mat	Source code
normalize_just	Source code
nrow.Heatmap	Man page Source code
oncoPrint	Man page Source code
order.comb_mat	Man page Source code
packLegend	Man page Source code
pct_v_pct	Man page
pheatmap	Man page Source code
pindex	Man page Source code
plot.Heatmap	Man page Source code
plot.HeatmapAnnotation	Man page Source code
plot.HeatmapList	Man page Source code
popViewport	Source code
prepare	Man page
prepare,Heatmap-method	Man page
pretty_breaks	Source code
print.comb_mat	Man page Source code
print.dendrogram	Source code
proper_format_lt	Source code
random_str	Source code
re_size	Man page
re_size,HeatmapAnnotation-method	Man page
recycle_gp	Source code
recycle_list	Source code
recycle_param	Source code
rep.list	Source code
resetHeatmap	Source code
resetHeatmapList	Source code
resize_matrix	Source code
restore_matrix	Man page Source code
richtext_grob2	Source code
rowAnnotation	Man page Source code
row_anno_barplot	Man page Source code
row_anno_boxplot	Man page Source code
row_anno_density	Man page Source code
row_anno_histogram	Man page Source code
row_anno_points	Man page Source code
row_anno_text	Man page Source code
row_dend	Man page
row_dend,Heatmap-method	Man page
row_dend,HeatmapList-method	Man page
row_order	Man page
row_order,Heatmap-method	Man page
row_order,HeatmapList-method	Man page
set_component_height	Man page
set_component_height,Heatmap-method	Man page
set_component_width	Man page
set_component_width,Heatmap-method	Man page
set_name	Man page Source code
set_name<-	Man page
set_nameAssign	Man page
set_size	Man page Source code
show	Man page
show,AnnotationFunction-method	Man page
show,ColorMapping-method	Man page
show,Heatmap-method	Man page
show,HeatmapAnnotation-method	Man page
show,HeatmapList-method	Man page
show,SingleAnnotation-method	Man page
size.AnnotationFunction	Man page Source code
size.HeatmapAnnotation	Man page Source code
size.SingleAnnotation	Man page Source code
size<-.AnnotationFunction	Man page
size<-.HeatmapAnnotation	Man page
size<-.SingleAnnotation	Man page
sizeAssign.AnnotationFunction	Man page
sizeAssign.HeatmapAnnotation	Man page
sizeAssign.SingleAnnotation	Man page
smartAlign2	Man page Source code
split_by_max	Source code
split_vec_by_NA	Source code
str.comb_mat	Man page Source code
subset_by_comb_ind	Source code
subset_by_intersect	Source code
subset_by_set_ind	Source code
subset_dendrogram	Source code
subset_gp	Man page Source code
subset_heatmap_by_column	Source code
subset_heatmap_by_row	Source code
subset_heatmap_list_by_column	Source code
subset_heatmap_list_by_row	Source code
subset_matrix_by_row	Man page Source code
subset_no	Man page Source code
subset_vector	Man page Source code
summary.Heatmap	Man page Source code
summary.HeatmapList	Man page Source code
t.comb_mat	Man page Source code
test_alter_fun	Man page Source code
textGrob	Source code
text_height	Source code
text_width	Source code
textbox_grob	Man page Source code
to_unit	Source code
to_unit_str	Source code
unify_mat_list	Man page Source code
unit.c	Source code
unit_in_mm	Source code
unit_to_numeric	Source code
unit_with_vp	Source code
upViewport	Source code
update_anno_extend	Source code
upset_left_annotation	Man page Source code
upset_right_annotation	Man page Source code
upset_top_annotation	Man page Source code
valid_just	Source code
validate_anno_names_with_matrix	Source code
validate_axis_param	Source code
validate_raster_matrix	Source code
vertical_continuous_legend_body	Source code
which_first_ht	Source code
which_last_ht	Source code
which_main_ht	Source code
width.AnnotationFunction	Man page Source code
width.Heatmap	Man page Source code
width.HeatmapAnnotation	Man page Source code
width.HeatmapList	Man page Source code
width.Legends	Man page Source code
width.SingleAnnotation	Man page Source code
width<-.AnnotationFunction	Man page
width<-.HeatmapAnnotation	Man page
width<-.SingleAnnotation	Man page
widthAssign.AnnotationFunction	Man page
widthAssign.HeatmapAnnotation	Man page
widthAssign.SingleAnnotation	Man page
widthDetails.Legend	Source code
widthDetails.annotation_axis	Man page Source code
widthDetails.legend	Man page Source code
widthDetails.legend_body	Man page Source code
widthDetails.packed_legends	Man page Source code
widthDetails.textbox	Man page Source code