API for jokergoo/ComplexHeatmap
Making Complex Heatmaps

Global functions
+.AdditiveUnit Man page
AdditiveUnit Man page Source code
AdditiveUnit-class Man page
AnnotationFunction Source code
ColorMapping Man page Source code
ColorMapping-class Man page
ComplexHeatmap-package Man page
Heatmap Man page Source code
Heatmap-class Man page
HeatmapAnnotation Man page Source code
HeatmapAnnotation-class Man page
HeatmapList Man page Source code
HeatmapList-class Man page
Legend Man page Source code
R_binary Source code
SingleAnnotation Man page Source code
SingleAnnotation-class Man page
abs_height Source code
abs_width Source code
add_heatmap Man page
add_heatmap,Heatmap-method Man page
add_heatmap,HeatmapAnnotation-method Man page
add_heatmap,HeatmapList-method Man page
add_horizon_polygon Source code
add_vp_name Source code
adjust_dend_by_leaf_width Man page
adjust_dend_by_x Source code
anno_barplot Man page Source code
anno_boxplot Man page Source code
anno_density Man page Source code
anno_empty Source code
anno_histogram Man page Source code
anno_horizon Source code
anno_image Source code
anno_joyplot Source code
anno_lines Source code
anno_link Man page Source code
anno_mark Source code
anno_oncoprint_barplot Man page Source code
anno_points Man page Source code
anno_simple Source code
anno_text Man page Source code
anno_width_and_height Source code
annotation_axis_grob Source code
annotation_legend_size Man page
annotation_legend_size,HeatmapList-method Man page
c.HeatmapAnnotation Source code
c.list Source code
check_gp Source code
cluster_within_group Source code
color_mapping_legend Man page
color_mapping_legend,ColorMapping-method Man page
columnAnnotation Man page Source code
column_anno_barplot Man page
column_anno_boxplot Man page
column_anno_density Man page
column_anno_histogram Man page
column_anno_link Man page
column_anno_points Man page
column_anno_text Man page
column_dend Man page
column_dend,Heatmap-method Man page
column_dend,HeatmapList-method Man page
column_order Man page
column_order,Heatmap-method Man page
column_order,HeatmapList-method Man page
compare_height Source code
compare_width Source code
component_height Man page
component_height,Heatmap-method Man page
component_height,HeatmapList-method Man page
component_width Man page
component_width,Heatmap-method Man page
component_width,HeatmapList-method Man page
construct_axis_grob Source code
construct_dend_segments Source code
cut_dendrogram Source code
decorate_annotation Man page Source code
decorate_column_dend Man page Source code
decorate_column_names Man page Source code
decorate_column_title Man page Source code
decorate_dend Man page Source code
decorate_dimnames Man page Source code
decorate_heatmap_body Man page Source code
decorate_row_dend Man page Source code
decorate_row_names Man page Source code
decorate_row_title Man page Source code
decorate_title Man page Source code
default_axis_param Source code
default_col Source code
dend_branches_heights Source code
dend_heights Source code
dend_xy Source code
dendrogramGrob Source code
densityHeatmap Man page Source code
dev.null Source code
dev.off2 Source code
dim.Heatmap Source code
discrete_legend_body Source code
dist2 Man page Source code
draw Man page
draw,Heatmap-method Man page
draw,HeatmapAnnotation-method Man page
draw,HeatmapList-method Man page
draw,SingleAnnotation-method Man page
draw_annotation Man page
draw_annotation,Heatmap-method Man page
draw_annotation_legend Man page
draw_annotation_legend,HeatmapList-method Man page
draw_dend Man page
draw_dend,Heatmap-method Man page
draw_dimnames Man page
draw_dimnames,Heatmap-method Man page
draw_heatmap_body Man page
draw_heatmap_body,Heatmap-method Man page
draw_heatmap_legend Man page
draw_heatmap_legend,HeatmapList-method Man page
draw_heatmap_list Man page
draw_heatmap_list,HeatmapList-method Man page
draw_legend Source code
draw_title Man page
draw_title,Heatmap-method Man page
draw_title,HeatmapList-method Man page
enhanced_basicplot Man page
generate_param_list_fun Source code
get_annotation_index Source code
get_branches_heights Source code
get_color_mapping_index Source code
get_color_mapping_list Man page
get_color_mapping_list,HeatmapAnnotation-method Man page
get_color_mapping_param_list Man page
get_color_mapping_param_list,HeatmapAnnotation-method Man page
get_dend_order Source code
get_dist Source code
get_figure_index Source code
get_heatmap_index Source code
get_row_annotation_index Source code
get_text_just Source code
grid.dendrogram Man page Source code
grid.dendrogram2 Man page
has_AnnotationFunction Source code
has_component Source code
heatmap_legend_size Man page
heatmap_legend_size,HeatmapList-method Man page
heightDetails.annotation_axis Source code
horizon_chart Source code
horizontal_continuous_legend_body Source code
ht_global_opt Man page Source code
increase_annotation_index Source code
increase_color_mapping_index Source code
increase_figure_index Source code
increase_heatmap_index Source code
increase_row_annotation_index Source code
is_abs_unit Man page Source code
is_fun_annotation Source code
is_matrix_annotation Source code
is_simple_annotation Source code
is_windows Source code
length.Heatmap Source code
length.HeatmapAnnotation Source code
list_component Source code
make_cluster Source code
make_column_cluster Man page
make_column_cluster,Heatmap-method Man page
make_layout Man page
make_layout,Heatmap-method Man page
make_layout,HeatmapList-method Man page
make_row_cluster Man page
make_row_cluster,Heatmap-method Man page
map_to_colors Man page
map_to_colors,ColorMapping-method Man page
max_text_height Man page Source code
max_text_width Man page Source code
merge.dendrogram Source code
message_wrap Source code
names.HeatmapAnnotation Source code
nobs.AnnotationFunction Source code
nobs.HeatmapAnnotation Source code
nobs.SingleAnnotation Source code
normalize_graphic_param_to_mat Source code
onAttach Source code
oncoPrint Man page Source code
packLegend Man page Source code
plotDataFrame Man page Source code
popViewport Source code
prepare Man page
prepare,Heatmap-method Man page
pretty_breaks Source code
print.dendrogram Source code
recycle_gp Source code
rep.list Source code
replaceLegend Source code
rowAnnotation Man page Source code
row_anno_barplot Man page Source code
row_anno_boxplot Man page Source code
row_anno_density Man page Source code
row_anno_histogram Man page Source code
row_anno_link Man page Source code
row_anno_points Man page Source code
row_anno_text Man page Source code
row_dend Man page
row_dend,Heatmap-method Man page
row_dend,HeatmapList-method Man page
row_order Man page
row_order,Heatmap-method Man page
row_order,HeatmapList-method Man page
s_abs_unit.default Source code
s_abs_unit.unit Source code
s_abs_unit.unit.arithmetic Source code
s_abs_unit.unit.list Source code
selectArea Man page Source code
set_component_height Man page
set_component_height,Heatmap-method Man page
show Man page
show,ColorMapping-method Man page
show,Heatmap-method Man page
show,HeatmapAnnotation-method Man page
show,HeatmapList-method Man page
show,SingleAnnotation-method Man page
split_by_max Source code
split_vec_by_NA Source code
stop_wrap Source code
subset_by_intersect Source code
subset_dendrogram Source code
subset_gp Source code
subset_heatmap_by_column Source code
subset_heatmap_by_row Source code
subset_heatmap_list_by_column Source code
subset_heatmap_list_by_row Source code
subset_matrix_by_row Source code
subset_vector Source code
summary.Heatmap Source code
unify_mat_list Man page Source code
unit.c Source code
upViewport Source code
update_anno_extend Source code
validate_axis_param Source code
vertical_continuous_legend_body Source code
warning_wrap Source code
widthDetails.annotation_axis Source code
jokergoo/ComplexHeatmap documentation built on Sept. 7, 2018, 4:05 a.m.