circos.trackLines: Add lines to the plotting regions in a same track

In jokergoo/circlize: Circular Visualization

Add lines to the plotting regions in a same track

Description

Add lines to the plotting regions in a same track

Usage

circos.trackLines(
    sectors,
    x, y,
    track.index = get.current.track.index(),
    col = par("col"),
    lwd = par("lwd"),
    lty = par("lty"),
    type = "l",
    straight = FALSE,
    area = FALSE,
    area.baseline = NULL,
    border = "black",
    baseline = "bottom",
    pt.col = par("col"),
    cex = par("cex"),
    pch = par("pch"),
    factors = sectors)

Arguments

sectors	A factor or a character vector which represents the categories of data.
factors	The same as sectors. It will be removed in future versions.
x	Data points on x-axis.
y	Data points on y-axis.
track.index	Index for the track.
col	Line color.
lwd	Line width.
lty	Line style.
type	Line type, similar as type argument in lines, but only in c("l", "o", "h", "s").
straight	Whether draw straight lines between points.
area	Whether to fill the area below the lines. If it is set to TRUE, col controls the filled color in the area and border controls the color of the line.
area.baseline	Deprecated, use baseline instead.
baseline	The base line to draw area, pass to circos.lines.
border	Color for border of the area.
pt.col	If type is "o", points color.
cex	If type is "o", points size.
pch	If type is "o", points type.

Details

The function adds lines in multiple cells by first splitting data into several parts in which each part corresponds to one factor (sector index) and then add lines in cells by calling circos.lines.

This function can be replaced by a for loop containing circos.lines.

Examples

# There is no example
NULL

jokergoo/circlize documentation built on Nov. 17, 2023, 11:32 a.m.