plot_log_param_ratios: Plots a grid of density plots of parameter estimates on the...

In joshwlambert/DAISIEmainland: Simulates Data for Phylogenetic Data on Islands for DAISIE with the Addition of Mainland Dynamics

Plots a grid of density plots of parameter estimates on the diagonal, scatter plots of parameter estimates on a log scale under the diagonal and scatter plots of the ratio of parameter estimates from ideal and empirial data.

Description

Plots a grid of density plots of parameter estimates on the diagonal, scatter plots of parameter estimates on a log scale under the diagonal and scatter plots of the ratio of parameter estimates from ideal and empirial data.

Usage

plot_log_param_ratios(
  param_set,
  data_folder_path,
  output_file_path,
  parameter,
  num_breaks,
  signif,
  scientific
)

Arguments

param_set	Numeric for the index of the parameter set from the parameter space
data_folder_path	String specifying the directory the data is read from
output_file_path	String specifying the directory the file is saved in, if NULL the file is returned to console and not saved
parameter	String specifying which parameter is plotted. "mainland_ex" plots mainland extinction as the variable, "mainland_sample_prob" plots mainland sampling probability as the variable and "both" plots all the data
num_breaks	A numeric specifying how many breaks are wanted on the plot axes
signif	A numeric specifying how many significant figures the axes labels have when plotting
scientific	A boolean determining whether the axis labels will be converted to scientific notation

Value

Void (saves plot)

joshwlambert/DAISIEmainland documentation built on July 14, 2024, 5:40 p.m.