annotate_gr: my_annotate
In jrboyd/ssvRecipes: Recipes using seqsetvis
annotate_gr R Documentation
my_annotate
Description
my_annotate
Usage
annotate_gr(gr, tss_gr, max_dist = 5000)
Arguments
gr_size
Examples
tx_gr = rtracklayer::import.gff("~/gencode.v36.annotation.gtf",
feature.type = "transcript", format = "gtf")
tss_gr = GenomicRanges::promoters(tx_gr, 1, 0)
qgr = CTCF_in_10a_overlaps_gr
annotate_gr(qgr, tss_gr, max_dist = 1e4)
jrboyd/ssvRecipes documentation built on May 22, 2022, 7:07 a.m.
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| annotate_gr | R Documentation |
my_annotate
Description
my_annotate
Usage
annotate_gr(gr, tss_gr, max_dist = 5000)
Arguments
gr_size |
Examples
tx_gr = rtracklayer::import.gff("~/gencode.v36.annotation.gtf",
feature.type = "transcript", format = "gtf")
tss_gr = GenomicRanges::promoters(tx_gr, 1, 0)
qgr = CTCF_in_10a_overlaps_gr
annotate_gr(qgr, tss_gr, max_dist = 1e4)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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