shuffleVmat: A function to shuffle a Vmat
In js2264/VplotR: Set of tools to make V-plots and compute footprint profiles
shuffleVmat R Documentation
A function to shuffle a Vmat
Description
This function works on a Vmat (the output of computeVmat()). It shuffles
the matrix to randomize the fragment densities.
Usage
shuffleVmat(Vmat)
Arguments
Vmat
A Vmat, usually output of computeVmat
Value
A shuffled Vmat object
Examples
data(bam_test)
data(ce11_all_REs)
Vmat <- computeVmat(bam_test, ce11_all_REs)
Vmat <- shuffleVmat(Vmat)
js2264/VplotR documentation built on Jan. 4, 2024, 7:49 p.m.
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| shuffleVmat | R Documentation |
A function to shuffle a Vmat
Description
This function works on a Vmat (the output of computeVmat()). It shuffles the matrix to randomize the fragment densities.
Usage
shuffleVmat(Vmat)
Arguments
Vmat |
A Vmat, usually output of computeVmat |
Value
A shuffled Vmat object
Examples
data(bam_test)
data(ce11_all_REs)
Vmat <- computeVmat(bam_test, ce11_all_REs)
Vmat <- shuffleVmat(Vmat)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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