countGenesPerClass: Count genes per class
In jsemple19/EMclassifieR: Classify DSMF data using the Expectation Maximisation algorithm
countGenesPerClass R Documentation
Count genes per class
Description
Count number of total genes in multigene clustering and then count
how many unique genes are present for each class (ideally they
should be evenly distributed between the classes)
Usage
countGenesPerClass(dataOrderedByClass, sampleName = "")
Arguments
dataOrderedByClass
A methylation matrix whose row names contain
fields separted by "__" where the first field is the gene name and the
third field is the class number
sampleName
String to be used in plot title
Value
A data frame of counts of reads in each class for each gene
jsemple19/EMclassifieR documentation built on Aug. 12, 2022, 2:57 p.m.
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| countGenesPerClass | R Documentation |
Count genes per class
Description
Count number of total genes in multigene clustering and then count how many unique genes are present for each class (ideally they should be evenly distributed between the classes)
Usage
countGenesPerClass(dataOrderedByClass, sampleName = "")
Arguments
dataOrderedByClass |
A methylation matrix whose row names contain fields separted by "__" where the first field is the gene name and the third field is the class number |
sampleName |
String to be used in plot title |
Value
A data frame of counts of reads in each class for each gene
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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