plotClassStability: Plot histograms of consistency of classfiications over...
In jsemple19/EMclassifieR: Classify DSMF data using the Expectation Maximisation algorithm
plotClassStability R Documentation
Plot histograms of consistency of classfiications over multiple repeats
Description
Plot histograms of consistency of classfiications over multiple repeats
Usage
plotClassStability(classVote, outFileBase, outPath, numClasses)
Arguments
classVote
A data.frame of reads with the class assignments from multiple EM repeats
outFileBase
A string that will be used in the filenames and titles of the plots produced
outPath
path to directory where plots will be saved
numClasses
An integer indicating the number of classes to learn
Value
classVote data frame with "topClass" and "topClassFreq" columns added
jsemple19/EMclassifieR documentation built on Aug. 12, 2022, 2:57 p.m.
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| plotClassStability | R Documentation |
Plot histograms of consistency of classfiications over multiple repeats
Description
Plot histograms of consistency of classfiications over multiple repeats
Usage
plotClassStability(classVote, outFileBase, outPath, numClasses)
Arguments
classVote |
A data.frame of reads with the class assignments from multiple EM repeats |
outFileBase |
A string that will be used in the filenames and titles of the plots produced |
outPath |
path to directory where plots will be saved |
numClasses |
An integer indicating the number of classes to learn |
Value
classVote data frame with "topClass" and "topClassFreq" columns added
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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